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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002692.1_2920_3056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2920 - 3056

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACCGGA

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCCCAG

U12 Branch Point Sequence:

GTGGTCCCAGGG

Flanking Amino Acid:

MPESPRFFLENGKHDEAWMV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

59.4

41.8

Major BPS

42.3

-0.4

1.7

52.1

45.2

Major PPT

85.8

0.81

0.9

80.6

Minor 5ss

35.8

-1.6

3.3

47.1

48.3

Minor BPS

32.5

-1.4

32.28

40.7

Associated Gene:

Gene:

SV2A

Ensembl Gene ID:

ENSAPLG00000004387

Chromosome:

PEDO01002692.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004500

1 - 3306

3306