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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002692.1_73_182_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

73 - 182

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGTGGGAC

5'SS Class:

major

3'SS Sequence:

GGGGCTGGGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CGTGTGTTAAAT

Flanking Amino Acid:

KRCRGAGGARGIWVLGMRVL

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.1

56.1

37.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

39.6

-0.6

1.7

34.6

45.5

Minor 5ss

29.7

-2.3

3.4

31.3

43.3

Minor BPS

46.8

-0.1

2.2

64.96

45.5

Associated Gene:

Gene:

SV2A

Ensembl Gene ID:

ENSAPLG00000004387

Chromosome:

PEDO01002692.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004500

1 - 3306

3306