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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002694.1_889_3968_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

889 - 3968

Intron Length:

3080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACCGAAA

5'SS Class:

weak_major

3'SS Sequence:

TTTCGGGGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

CTGACAGTGATT

Flanking Amino Acid:

QQRAILPCIKDPEGGDGAGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.3

56.9

43.8

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

63.3

0.3

1.1

43.3

Minor 5ss

35.6

-1.6

3.3

39.1

46.3

Minor BPS

-0.4

2.2

60.34

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005716

Chromosome:

PEDO01002694.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005902

642 - 4141

3500