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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002695.1_4676_5036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4676 - 5036

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTGG

5'SS Class:

major

3'SS Sequence:

TTGCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCCTCCTCACCC

Flanking Amino Acid:

SITCSQTKRKAVSSPVEESE

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

61.5

45.6

Major BPS

72.4

0.56

73.5

32.5

Major PPT

82.2

0.72

0.8

73.6

36.9

Minor 5ss

35.1

-1.7

3.4

46.9

48.5

Minor BPS

49.4

-0

1.9

57.93

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012923

Chromosome:

PEDO01002695.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013482

955 - 6967

6013