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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002695.1_5976_6419_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5976 - 6419

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGTGTGG

5'SS Class:

major

3'SS Sequence:

TGGACGCCTGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

TCCTTCTGGACG

Flanking Amino Acid:

IGSAHANKPKGRVAKMAFVN

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.1

50.2

43.1

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

59.6

0.22

51.5

39.1

Minor 5ss

29.4

-2.4

3.4

37.8

Minor BPS

54.8

1.6

58.37

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012923

Chromosome:

PEDO01002695.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013482

955 - 6967

6013