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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002772.1_2621_3218_F

Intron Information:

Intron Rank:

140522

Intron Class:

major

Intron Phase:

Intron Coordinates:

2621 - 3218

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTAATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TCTTTCTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.3

40.8

Major BPS

82.2

0.8

71.9

35.8

Major PPT

77.8

0.62

0.9

78.4

33.8

Minor 5ss

35.6

-1.6

2.6

35.7

40.4

Minor BPS

80.7

0.94

81.43

33.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025643

Chromosome:

PEDO01002772.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026357

2464 - 4281

1818