Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002774.1_11263_11374_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11263 - 11374

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCGGAGCC

5'SS Class:

major

3'SS Sequence:

TGGCTCACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCGCAT

U12 Branch Point Sequence:

CCTGGCTCACCC

Flanking Amino Acid:

YTLQLQRVDERRLIQFGLMK

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

62.2

37.6

Major BPS

61.2

0.28

1.3

71.4

36.6

Major PPT

65.1

0.34

0.9

55.4

40.1

Minor 5ss

25.7

-2.8

3.3

33.9

41.7

Minor BPS

41.3

-0.6

2.2

49.56

47.2

Associated Gene:

Gene:

NPRL2

Ensembl Gene ID:

ENSAPLG00000015009

Chromosome:

PEDO01002774.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015634

10848 - 14570

3723