Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002774.1_11493_11566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11493 - 11566

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTGC

5'SS Class:

major

3'SS Sequence:

TTTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TGGCAGCTGACA

Flanking Amino Acid:

EECLSYVTKPGHKRASLRDV

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

43.1

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

43.1

-0.8

3.1

59.3

45.4

Minor BPS

39.1

-0.8

2.3

50.66

40.2

Associated Gene:

Gene:

NPRL2

Ensembl Gene ID:

ENSAPLG00000015009

Chromosome:

PEDO01002774.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015634

10848 - 14570

3723