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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002774.1_12327_12569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12327 - 12569

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAG

U12 Branch Point Sequence:

GCTGTGAGAACT

Flanking Amino Acid:

NAKGKCTLPIDESNTIHLKV

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

54.4

0.11

1.4

63.4

35.6

Major PPT

0.65

0.7

69.7

31.1

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

-0.6

2.3

57.74

44.9

Associated Gene:

Gene:

NPRL2

Ensembl Gene ID:

ENSAPLG00000015009

Chromosome:

PEDO01002774.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015634

10848 - 14570

3723