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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002774.1_2638_4049_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2638 - 4049

Intron Length:
1412

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGGGGT

5'SS Class:
strong_major

3'SS Sequence:
CCTCTCCCACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTCCAG

U12 Branch Point Sequence:
CCTCTCCCACCA

Flanking Amino Acid:
PPKKDLVLEQVPVIWDHLLR

Intron Amino Acid Position:
351

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
1
69.5
41.1

Major BPS
46.4
-0.2
1.7
61.8
44.5

Major PPT
70.5
0.46
0.9
62.9
33.1

Minor 5ss
37
-1.5
3.6
55.4
48.8

Minor BPS
40.5
-0.7
2
48.95
41.9

Associated Gene:

Gene:
ZMYND10

Ensembl Gene ID:

Chromosome:
PEDO01002774.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1800 - 10698
8899