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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002775.1_2610_2702_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2610 - 2702

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCGCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GGCGCGCTGAGT

Flanking Amino Acid:

TPDPKEKQTCDIRLRVRAEY

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.2

39.3

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

64.4

0.33

0.9

57.2

33.4

Minor 5ss

29.7

-2.3

3.5

37.8

42.4

Minor BPS

36.1

-1

2.4

48.97

44.3

Associated Gene:

Gene:

DEDD

Ensembl Gene ID:

ENSAPLG00000029371

Chromosome:

PEDO01002775.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024336

21 - 4130

4110