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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002778.1_2560_2820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2560 - 2820

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCGCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

GTGCCCCCATGT

Flanking Amino Acid:

YNPQTPGTPAMYNTDQFSPY

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.8

30.2

Major BPS

48.9

-0

1.3

39.1

Major PPT

63.2

0.3

57.9

33.2

Minor 5ss

34.2

-1.8

3.4

41.4

Minor BPS

38.8

-0.7

2.2

55.44

45.9

Associated Gene:

Gene:

SUPT5H

Ensembl Gene ID:

ENSAPLG00000005365

Chromosome:

PEDO01002778.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005552

1196 - 8796

7601