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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002778.1_2980_3115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2980 - 3115

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCGTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

GGTGCCGTGACG

Flanking Amino Acid:

WDPNNPNTPSRADEDFEYGF

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

48.6

-0

1.2

40.4

Major PPT

69.7

0.44

0.8

61.6

34.9

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

47.7

-0.3

2.2

56.03

45.3

Associated Gene:

Gene:

SUPT5H

Ensembl Gene ID:

ENSAPLG00000005365

Chromosome:

PEDO01002778.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005552

1196 - 8796

7601