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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002778.1_5101_5197_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5101 - 5197

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

GCCCTGCCGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTTCTCCACCC

Flanking Amino Acid:

ILFSDLTMHELKVLPRDLQL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

72.7

0.56

30.1

Major PPT

58.4

0.19

49.8

39.4

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

46.4

-0.2

2.1

62.86

42.9

Associated Gene:

Gene:

SUPT5H

Ensembl Gene ID:

ENSAPLG00000005365

Chromosome:

PEDO01002778.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005552

1196 - 8796

7601