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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002778.1_6356_6446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6356 - 6446

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGCC

U12 Branch Point Sequence:

CCCCCCTTGCAG

Flanking Amino Acid:

RGIYKDDIAQKDWFAKRKKF

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

21.4

-1.8

3.9

32.1

34.8

Major PPT

75.2

0.57

0.8

68.2

25.3

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

35.5

-1.2

3.4

40.51

43.9

Associated Gene:

Gene:

SUPT5H

Ensembl Gene ID:

ENSAPLG00000005365

Chromosome:

PEDO01002778.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005552

1196 - 8796

7601