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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002797.1_4665_5369_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4665 - 5369

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCATCCCCT

5'SS Class:

weak_major

3'SS Sequence:

TAGACACCCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TTTGCTGTGATA

Flanking Amino Acid:

HIYLQPIGNVGLRVTSERAP

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.4

52.1

46.1

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

59.4

0.21

48.2

40.2

Minor 5ss

41.4

-1

57.2

Minor BPS

49.9

-0

2.1

69.19

38.1

Associated Gene:

Gene:

AMZ1

Ensembl Gene ID:

ENSAPLG00000003478

Chromosome:

PEDO01002797.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003553

3300 - 5914

2615