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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002804.1_2275_2392_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2275 - 2392

Intron Length:
118

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATC|GTGAGTGAT

5'SS Class:
major

3'SS Sequence:
CCCCCTTTGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAC

U12 Branch Point Sequence:
GAGGCGCTGACG

Flanking Amino Acid:
IGSTPPPDRIAWAWKENVLE

Intron Amino Acid Position:
226

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.3
0.43
1.3
70.2
35.9

Major BPS
53.9
0.1
1.2
46.4
38.9

Major PPT
70
0.45
0.9
63.7
36.8

Minor 5ss
30.4
-2.2
3.3
40.6
40.2

Minor BPS
39
-1
2.3
40.69
43.5

Associated Gene:

Gene:
KIRREL1

Ensembl Gene ID:

Chromosome:
PEDO01002804.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

836 - 3314
2479