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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002815.1_2435_2709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2435 - 2709

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAC

U12 Branch Point Sequence:

CGGAGCCCACCC

Flanking Amino Acid:

VIIANIFVPTELQTVRTALA

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

45.4

-0.2

1.2

49.9

36.8

Major PPT

72.9

0.52

0.9

64.7

36.5

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

-1.3

2.1

36.54

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013770

Chromosome:

PEDO01002815.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014360

95 - 3969

3875