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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002828.1_1650_1919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1650 - 1919

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTGCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CCTTCCTTGAGA

Flanking Amino Acid:

RAYQEIQELQMQIRNLTSLT

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

82.4

0.73

0.8

79.1

32.9

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

64.7

0.46

1.7

69.88

42.9

Associated Gene:

Gene:

CHPF2

Ensembl Gene ID:

ENSAPLG00000009143

Chromosome:

PEDO01002828.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009512

21 - 3436

3416