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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002849.1_131_589_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

131 - 589

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTTATTGA

5'SS Class:

weak_major

3'SS Sequence:

CATTAAATGCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TCAACATTAAAT

Flanking Amino Acid:

RLVKSQQSAGIGRS*

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.7

0.09

1.2

55.1

38.3

Major BPS

73.5

0.58

79.3

29.4

Major PPT

49.7

-0

1.2

46.7

43.6

Minor 5ss

43.8

-0.7

2.6

54.1

43.5

Minor BPS

56.5

0.28

1.8

72.62

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027813

Chromosome:

PEDO01002849.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027951

118 - 2243

2126