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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002854.1_1939_2037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1939 - 2037

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GTGCTCACACGT

Flanking Amino Acid:

SQYVFAETAARVLSAVIVAS

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

79.6

0.67

0.9

77.2

37.1

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

36.6

-0.9

50.85

Associated Gene:

Gene:

TMEM199

Ensembl Gene ID:

ENSAPLG00000013900

Chromosome:

PEDO01002854.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014491

21 - 2430

2410