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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002873.1_15084_15131_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15084 - 15131

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-CG

5'SS Sequence:

GCG|GCATGCCCC

5'SS Class:

major

3'SS Sequence:

GAGCCCAGGGGCG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGGAC

U12 Branch Point Sequence:

GGAGGGTGAGCC

Flanking Amino Acid:

SYTSYTMAICEEMEKLTWPA

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.3

58.9

44.4

Major BPS

44.7

-0.3

1.3

40.4

Major PPT

22.2

-1.6

3.1

24.5

30.9

Minor 5ss

35.4

-1.7

52.2

44.6

Minor BPS

32.6

-1.3

2.3

37.59

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005253

Chromosome:

PEDO01002873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004909

8064 - 21661

13598

ENSAPLT00000047690

8064 - 22124

14061

ENSAPLT00000038092

8064 - 22124

14061

ENSAPLT00000005449

8064 - 19824

11761