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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002873.1_15179_15262_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15179 - 15262

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCGCATG

5'SS Class:

major

3'SS Sequence:

GAACGCTGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TGGATCTGAACG

Flanking Amino Acid:

TWPAADTKKRVEMGIGNRKG

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

59.9

46.4

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

53.2

0.07

1.1

42.6

42.7

Minor 5ss

-1.6

3.2

39.6

46.1

Minor BPS

54.1

-0

1.6

57.65

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005253

Chromosome:

PEDO01002873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047690

8064 - 22124

14061

ENSAPLT00000038092

8064 - 22124

14061

ENSAPLT00000005449

8064 - 19824

11761

ENSAPLT00000004909

8064 - 21661

13598