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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002873.1_15705_16050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15705 - 16050

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

ATTCCCACATGT

Flanking Amino Acid:

GKDLTPITPSSGFSIELASA

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

78.5

0.64

0.9

72.5

37.8

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

42.5

-0.4

2.2

65.51

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005253

Chromosome:

PEDO01002873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004909

8064 - 21661

13598

ENSAPLT00000047690

8064 - 22124

14061

ENSAPLT00000038092

8064 - 22124

14061

ENSAPLT00000005449

8064 - 19824

11761