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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002873.1_16136_16364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16136 - 16364

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GGCTCCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGACAT

U12 Branch Point Sequence:

TGTGCTGAGACA

Flanking Amino Acid:

GLPISTTHCKVGSVVSVGWL

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

46.8

-0.2

1.3

52.7

43.2

Major PPT

63.1

0.3

57.9

38.5

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

43.1

-0.5

2.3

58.15

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005253

Chromosome:

PEDO01002873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047690

8064 - 22124

14061

ENSAPLT00000038092

8064 - 22124

14061

ENSAPLT00000005449

8064 - 19824

11761

ENSAPLT00000004909

8064 - 21661

13598