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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002873.1_19001_19142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19001 - 19142

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

GTCCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGTAC

U12 Branch Point Sequence:

GAGCTCGTACCA

Flanking Amino Acid:

REAMDQVHLSGCLKEKTLEN

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

47.7

-0.1

1.3

46.7

38.6

Major PPT

75.9

0.58

0.8

69.2

31.4

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

42.4

-0.5

2.1

50.06

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005253

Chromosome:

PEDO01002873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038092

8064 - 22124

14061

ENSAPLT00000004909

8064 - 21661

13598

ENSAPLT00000047690

8064 - 22124

14061