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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002873.1_23120_23214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23120 - 23214

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

TTTACCTCATGG

Flanking Amino Acid:

SIKLQVTSIPRGRELPEGQE

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.5

38.7

Major BPS

73.5

0.58

73.6

32.5

Major PPT

75.3

0.57

0.7

69.5

24.3

Minor 5ss

30.3

-2.3

3.3

46.8

Minor BPS

47.2

-0.3

2.2

60.47

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023569

Chromosome:

PEDO01002873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029164

21822 - 26587

4766