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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002873.1_8727_8804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8727 - 8804

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCGCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAC

U12 Branch Point Sequence:

GCTCCCTTACCG

Flanking Amino Acid:

LMAGSISAMFGSAVWQLVAS

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

56.6

0.16

1.1

48.9

36.2

Major PPT

77.8

0.63

0.8

73.7

31.4

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

58.6

0.13

1.8

61.57

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005253

Chromosome:

PEDO01002873.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038092

8064 - 22124

14061

ENSAPLT00000005449

8064 - 19824

11761

ENSAPLT00000004909

8064 - 21661

13598

ENSAPLT00000047690

8064 - 22124

14061