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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002889.1_1580_1669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1580 - 1669

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CGCTGTCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGGCCCCGAGCT

Flanking Amino Acid:

PPRLASAFQPGEAVLALGFG

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.7

41.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

67.5

0.39

60.9

40.2

Minor 5ss

40.2

-1.1

2.8

45.4

42.5

Minor BPS

45.2

-0.2

64.62

44.8

Associated Gene:

Gene:

TYSND1

Ensembl Gene ID:

ENSAPLG00000019696

Chromosome:

PEDO01002889.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046359

21 - 2591

2571