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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002906.1_2614_2659_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2614 - 2659

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCCATCCGC

5'SS Class:

weak_major

3'SS Sequence:

GTCTCCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCCT

U12 Branch Point Sequence:

GTCTCCTTTACA

Flanking Amino Acid:

QRRRGSLSLLMSSCTDRSLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.12

1.3

51.2

42.3

Major BPS

34.7

-0.9

4.2

39.9

Major PPT

82.3

0.73

0.8

75.8

32.8

Minor 5ss

25.1

-2.9

3.8

34.2

35.1

Minor BPS

70.8

0.65

1.6

76.38

40.4

Associated Gene:

Gene:

LHX5

Ensembl Gene ID:

ENSAPLG00000020701

Chromosome:

PEDO01002906.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023006

42 - 2741

2700