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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002933.1_4044_11006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4044 - 11006

Intron Length:

6963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

TGCTCCTAACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

0.55

71.8

31.4

Major PPT

71.6

0.49

0.7

65.2

23.5

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

57.2

0.3

76.24

46.3

Associated Gene:

Gene:

RNF41

Ensembl Gene ID:

ENSAPLG00000029778

Chromosome:

PEDO01002933.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029282

21 - 11889

11869