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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002984.1_943_1066_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

943 - 1066

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTCTTTCTC

5'SS Class:

weak_major

3'SS Sequence:

GCTTTAGAAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTGTTAATAACT

Flanking Amino Acid:

KNAIKKFLNNNHRII

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.4

54.6

42.5

Major BPS

84.4

0.85

34.5

Major PPT

49.8

-0

1.2

50.6

41.3

Minor 5ss

42.8

-0.8

2.8

58.3

39.3

Minor BPS

53.5

0.19

1.9

74.77

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018808

Chromosome:

PEDO01002984.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037624

28 - 1081

1054