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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002990.1_1807_1888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1807 - 1888

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGGG

5'SS Class:

major

3'SS Sequence:

TCCTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CTCTCCCCACTC

Flanking Amino Acid:

NLSEPVHPFIRRSVNVVEKY

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.4

58.8

42.9

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

82.1

0.72

0.7

76.6

25.4

Minor 5ss

26.1

-2.7

3.1

31.9

42.5

Minor BPS

43.8

-0.4

2.1

54.71

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021525

Chromosome:

PEDO01002990.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027427

21 - 3806

3786