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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01002990.1_1948_2013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1948 - 2013

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCG

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAC

U12 Branch Point Sequence:

CCGCACCCACCC

Flanking Amino Acid:

AAVEYLTLVKGGAETVKKVN

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

65.8

40.2

Major BPS

45.3

-0.2

1.4

51.4

43.9

Major PPT

68.5

0.42

0.9

58.3

38.4

Minor 5ss

26.2

-2.7

3.2

31.7

42.8

Minor BPS

34.9

-1.1

1.9

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021525

Chromosome:

PEDO01002990.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027427

21 - 3806

3786