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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003014.1_1555_1814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1555 - 1814

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CGGTTTTTGACC

Flanking Amino Acid:

MGFASFDTTKGKKVDGAANA

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

86.6

0.82

0.7

84.2

23.8

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

59.2

0.27

1.3

61.01

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018877

Chromosome:

PEDO01003014.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043010

392 - 2328

1937