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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003025.1_1263_1301_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1263 - 1301

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTCGCCCA

5'SS Class:

weak_major

3'SS Sequence:

ATCCCTGCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TCGCCCACCACT

Flanking Amino Acid:

VGMLHRVGKRAQPQVRIIPA

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.9

0.14

1.4

46.2

43.2

Major BPS

61.3

0.28

52.7

34.2

Major PPT

71.5

0.48

0.9

61.8

39.3

Minor 5ss

22.7

-3.1

3.7

23.8

36.6

Minor BPS

43.8

-0.4

2.2

62.63

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025656

Chromosome:

PEDO01003025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037776

598 - 3968

3371

ENSAPLT00000020530

316 - 2409

2094