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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003025.1_1632_2227_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1632 - 2227

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCTCCTTGC

5'SS Class:

weak_major

3'SS Sequence:

TGGGATGACTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCCCAA

U12 Branch Point Sequence:

TTCCCTGGGATG

Flanking Amino Acid:

AGPQPEAGCLGTALETVREP

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.4

47.1

45.4

Major BPS

46.7

-0.2

1.2

52.4

Major PPT

55.2

0.12

1.1

50.8

Minor 5ss

31.2

-2.2

3.9

39.7

Minor BPS

41.4

-0.8

2.1

47.87

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025656

Chromosome:

PEDO01003025.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020530

316 - 2409

2094