Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_116446_117164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116446 - 117164

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCTGA

5'SS Class:

major

3'SS Sequence:

CTCCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGCAG

U12 Branch Point Sequence:

GGCTGCTGCAGG

Flanking Amino Acid:

QTFANLSVSNVFGMVPFLNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

62.3

40.8

Major BPS

38.5

-0.7

1.7

47.8

Major PPT

74.8

0.56

0.7

24.8

Minor 5ss

38.3

-1.3

47.2

48.2

Minor BPS

36.1

-1.2

2.3

37.22

44.8

Associated Gene:

Gene:

MROH1

Ensembl Gene ID:

ENSAPLG00000008718

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037027

78796 - 118118

39323

ENSAPLT00000032986

79249 - 118118

38870

ENSAPLT00000025193

78796 - 118118

39323