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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_12033_12263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12033 - 12263

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CGCACCCTAACG

Flanking Amino Acid:

HAQQQKVVNKLIQFLISLVQ

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

69.7

41.3

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

84.7

0.78

0.7

77.3

31.4

Minor 5ss

39.1

-1.2

51.7

Minor BPS

49.6

-0.1

1.9

53.65

46.6

Associated Gene:

Gene:

HSF1

Ensembl Gene ID:

ENSAPLG00000007598

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007952

382 - 27314

26933