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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_2430_2519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2430 - 2519

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTGCCCTCACCG

Flanking Amino Acid:

FSVDTSALLDLFSPSMTVTD

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

31.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

79.8

0.67

0.9

31.6

Minor 5ss

-1.8

2.7

42.8

36.9

Minor BPS

47.3

-0.3

1.9

52.86

47.5

Associated Gene:

Gene:

HSF1

Ensembl Gene ID:

ENSAPLG00000007598

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007952

382 - 27314

26933