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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_2626_5870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2626 - 5870

Intron Length:

3245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CTCTCCTGCACA

Flanking Amino Acid:

EKCLSVACLDKNELNDHLDT

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

69.1

41.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

72.5

0.51

0.9

67.4

32.5

Minor 5ss

36.2

-1.6

2.9

43.1

37.6

Minor BPS

55.1

0.15

67.78

44.7

Associated Gene:

Gene:

HSF1

Ensembl Gene ID:

ENSAPLG00000007598

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007952

382 - 27314

26933