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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_5963_6037_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5963 - 6037

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

CATCCTGCAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

CGTTCATCGACT

Flanking Amino Acid:

SPSRSPKIEENEPSTTTAAA

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

40.3

Major BPS

72.4

0.56

1.2

39.9

Major PPT

46.9

-0.1

1.7

51.1

37.6

Minor 5ss

23.2

-3.1

3.7

31.5

42.2

Minor BPS

53.5

0.19

1.9

73.8

42.8

Associated Gene:

Gene:

HSF1

Ensembl Gene ID:

ENSAPLG00000007598

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007952

382 - 27314

26933