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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_68776_72462_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

68776 - 72462

Intron Length:

3687

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCACCAGCC

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTGCCCTCACGC

Flanking Amino Acid:

GDARCWAVARDIRNTVGNIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.4

58.9

41.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

69.6

0.44

0.8

60.5

29.4

Minor 5ss

25.4

-2.8

4.2

33.5

41.9

Minor BPS

43.4

-0.5

2.1

51.55

45.5

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008647

68629 - 77613

8985