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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_72618_72804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72618 - 72804

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCGTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GCGCTGTCACCC

Flanking Amino Acid:

FLEKMENPDYWRTVQDKMTG

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

55.8

43.4

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

71.6

0.49

0.8

65.4

30.4

Minor 5ss

30.4

-2.2

3.3

34.5

43.8

Minor BPS

36.4

-1

2.1

39.78

39.7

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031062

68301 - 77613

9313

ENSAPLT00000022763

71610 - 77613

6004

ENSAPLT00000008647

68629 - 77613

8985

ENSAPLT00000040335

67653 - 77613

9961