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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_72923_73011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72923 - 73011

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAC

U12 Branch Point Sequence:

CACGCTGCAGCC

Flanking Amino Acid:

FGDVHFDPYEPAVDFFSHEV

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

42.9

-0.4

1.2

45.5

37.5

Major PPT

67.5

0.39

57.5

43.2

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

35.4

-1.1

2.1

38.71

40.5

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040335

67653 - 77613

9961

ENSAPLT00000031062

68301 - 77613

9313

ENSAPLT00000022763

71610 - 77613

6004

ENSAPLT00000008647

68629 - 77613

8985