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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_73114_73363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73114 - 73363

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GCCTGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

GGCTCCTGGAGC

Flanking Amino Acid:

FIPSLIEKEKVSKLVHAIKM

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

65.2

0.34

0.9

56.9

33.6

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

48.3

-0.1

1.8

56.08

42.3

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040335

67653 - 77613

9961

ENSAPLT00000031062

68301 - 77613

9313

ENSAPLT00000022763

71610 - 77613

6004

ENSAPLT00000008647

68629 - 77613

8985