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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_74770_75788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74770 - 75788

Intron Length:

1019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

CCTGACCCAGCC

Flanking Amino Acid:

ISPSGQWLASGSDDCTVRFW

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

87.7

Major BPS

51.1

0.03

1.2

39.9

Major PPT

68.9

0.43

62.2

39.8

Minor 5ss

32.8

-2

3.3

47.8

47.9

Minor BPS

36.8

-1

44.06

43.5

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031062

68301 - 77613

9313

ENSAPLT00000022763

71610 - 77613

6004

ENSAPLT00000008647

68629 - 77613

8985

ENSAPLT00000040335

67653 - 77613

9961