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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_76713_76829_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76713 - 76829

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

CTCTCTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CTCTCTCTCACA

Flanking Amino Acid:

WVSSMAIHPGGDNIICGSYD

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

80.8

0.69

0.7

75.3

26.8

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

48.5

-0.1

2.1

63.12

43.7

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040335

67653 - 77613

9961

ENSAPLT00000031062

68301 - 77613

9313

ENSAPLT00000022763

71610 - 77613

6004

ENSAPLT00000008647

68629 - 77613

8985