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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_76915_77131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76915 - 77131

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CCCCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTCGCCCTGACG

Flanking Amino Acid:

DLSTRPYQLLRHHKKALRSV

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

81.1

0.7

75.4

26.7

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

48.7

-0.2

1.9

54.98

46.4

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031062

68301 - 77613

9313

ENSAPLT00000022763

71610 - 77613

6004

ENSAPLT00000008647

68629 - 77613

8985

ENSAPLT00000040335

67653 - 77613

9961