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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003039.1_77240_77459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77240 - 77459

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

TCTCCCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TCTCCCCCCACA

Flanking Amino Acid:

TVIVCHGMVYNDLLQNPLLV

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

57.1

42.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

75.4

0.57

0.7

68.8

Minor 5ss

27.3

-2.6

3.2

30.6

37.1

Minor BPS

45.2

-0.3

2.2

61.96

43.8

Associated Gene:

Gene:

BOP1

Ensembl Gene ID:

ENSAPLG00000008324

Chromosome:

PEDO01003039.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040335

67653 - 77613

9961

ENSAPLT00000031062

68301 - 77613

9313

ENSAPLT00000022763

71610 - 77613

6004

ENSAPLT00000008647

68629 - 77613

8985